Eligible Compensation Errors in 401(k) Plans: What are They and How to Fix Them

by | Apr 29, 2026

Last year, PriceKubecka performed nearly 500 401(k) audits. We saw a lot of issues. But after late deposits, one stood out: Eligible compensation errors

They’re common. They’re confusing. And if ignored, they can get expensive. The good news? They’re fixable—and preventable.

What Is “Eligible Compensation” in a 401(k) Plan?

Most employers hear “compensation” and only think salary/wages. But your plan document may include (or exclude) much more including overtime, bonuses, commissions, and tips.

And that’s where problems start.

Key question:
If an employee elects to defer 4%, do you know exactly what that 4% applies to?

If your payroll team doesn’t know—or your system isn’t set up correctly—you likely have errors.

Man working on phone

The Most Common Issue: Getting Compensation Wrong

When plans don’t follow their own definition of eligible compensation, it leads to:

  • Understatements (missed deferrals or employer contributions)
  • Overstatements (too much contributed)

Why does this happen?

  • Misconfigured payroll codes
  • Payroll provider changes
  • Lack of internal training
  • Plan rules not aligned with payroll setup

At its core, this is a system + awareness problem.

How to Fix Missed Compensation (Exclusions)

If eligible compensation was excluded, it creates a: Missed Deferral Opportunity (MDO)

That means employees missed the chance to contribute to their retirement.

Correction typically requires:

  • QNEC (Qualified Non-Elective Contribution)
    • 25%–50% of the missed deferral
  • 100% of missed employer match
  • Lost earnings

💡 Timing matters:

  • Fix it quickly → ~25% correction
  • Delay → up to 50%

Can you self-correct?

Often, yes. If the error is operational and fixed within two years, it may qualify for IRS self-correction (SCP). For long-term or complex issues, involve an ERISA attorney.

    How to Fix Overstated Compensation (Inclusions)

    If too much compensation was included, corrections are usually simpler:

    • Retroactively amend the plan, OR
    • Return excess contributions to participants

    Which route is best?  It depends on your facts and circumstances. Always coordinate with your TPA, auditor, and ERISA counsel.

    How to Prevent Eligible Compensation Errors (Best Practices)

    This is where most plans win—or keep repeating mistakes.

    1. Simplify Your Plan Definition

    Use a clear, consistent definition of compensation across all contribution types.

    1. Align Payroll + Plan Rules

    Every payroll change should trigger one question: Does this impact eligible compensation?

    1. Control Pay Codes

    Before adding new pay codes:

    • Define how they’re treated in the plan
    • Map them correctly in payroll
    1. Perform quarterly or semi-annual payroll audits:
    • Review all wage codes
    • Check for anomalies
    • Validate calculations
    1. Train Your Team (Every Year)

    Your payroll and HR teams should clearly understand:

    • What counts as compensation
    • How deferrals are calculated
    • Where errors typically occur

    Why This Matters for Your 401(k) Audit

    Eligible compensation errors are one of the most common audit findings—and one of the most preventable. Left unchecked, they can lead to:

    • Costly corrections
    • Compliance risk
    • Frustrating, time-consuming audits

    Handled correctly, they become a non-issue.

    Work With a 401(k) Audit Specialist

    At PriceKubecka, we don’t just identify errors—we help you avoid them. Our approach:

    • Full-population testing (not sampling)
    • Smarter upfront data requests
    • Minimal back-and-forth
    • Typically <5 hours of your time

    👉 Flat-fee 401(k) audits. No surprises. No chaos.

    Need Help Fixing or Preventing Compensation Errors?

    If this showed up in your audit—or you want to make sure it doesn’t next year—we can help.

    Talk to a PriceKubecka 401(k) audit expert today.

    Frequently Asked Questions

    What is a missed deferral opportunity (MDO)?

    A missed deferral opportunity (MDO) occurs when an employee’s eligible compensation was not properly included, causing them to miss contributions to their 401(k). This is considered an operational error and typically requires corrective contributions from the employer.

    What causes eligible compensation errors in 401(k) plans?

    The most common causes include:

    • Incorrect payroll system setup
    • Misclassified or new pay codes
    • Changes in payroll providers
    • Lack of training or oversight
    • Plan definitions not aligned with payroll
    How can employers prevent 401(k) compensation errors?

    To prevent errors:

    • Use a simple, consistent compensation definition
    • Align payroll systems with plan rules
    • Review pay codes regularly
    • Conduct periodic payroll audits
    • Train HR and payroll teams annually
    Are eligible compensation errors common in 401(k) audits?

    Yes. Eligible compensation errors are one of the most frequently identified issues in 401(k) audits, second only to late deposits. They are also one of the most preventable with proper processes in place.

    What happens if eligible compensation errors are not corrected?

    Uncorrected errors can lead to:

    • IRS and DOL compliance issues
    • Financial penalties
    • Required plan corrections
    • Increased audit scrutiny

    Frequently Asked Questions

    What should I do if I missed the October 15 Form 5500 deadline?

    First, confirm that October 15 was actually your plan’s deadline and that a valid extension applied. If the deadline has passed, determine what is preventing the Form 5500 from being completed. If a required 401(k) audit is unfinished or hasn’t started, contact an experienced employee benefit plan auditor immediately and work with your other advisors to determine the appropriate filing and penalty-relief options.

    Can you file Form 5500 after the deadline?

    Yes. A delinquent Form 5500 can still be filed after its due date. Filing late does not eliminate the filing requirement, however, and potential DOL and IRS penalties may apply. Eligible plan administrators may be able to use the DOL’s Delinquent Filer Voluntary Compliance Program to reduce certain penalties.

    What are the penalties for filing Form 5500 late?

    The Department of Labor may assess substantial civil penalties for failure to file a complete and accurate Form 5500. Current Form 5500 instructions state a potential DOL penalty of up to $2,739 per day. The IRS can separately assess $250 per day, up to $150,000 per plan year, for certain late Form 5500-series filings. Actual penalties and available relief depend on the circumstances.

    What is the DOL's Delinquent Filer Voluntary Compliance Program?

    The DFVCP is a Department of Labor program that allows qualifying plan administrators to voluntarily submit delinquent Form 5500 filings and pay reduced civil penalties. Eligibility generally requires correcting the filing before the DOL has provided written notice of the failure to file.

    What if my 401(k) audit hasn't started and the Form 5500 deadline has already passed?

    If your plan is required to have an independent audit, missing the Form 5500 deadline does not remove that requirement. Contact an employee benefit plan auditor as soon as possible, explain that the filing is already late and determine what records are needed to begin the audit immediately. Work simultaneously with your TPA and other advisors to address the delinquent filing and determine whether penalty-relief options are available.

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